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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015881709.1_cds_XP_016437866.1_33587
CDS Infomation

[gene=LOC107763873] [db_xref=GeneID:107763873] [protein=homogentisate geranylgeranyltransferase-like] [protein_id=XP_016437866.1] [location=complement(join(9554..9595,9678..9782,9880..9975,10140..10211,10470..10565,10692..10793,11222..11311,11944..12027,12232..12306,12739..12822,12949..13211,13564..13612))] [gbkey=CDS]
Sequence

ATGCTCCATTTACATGCTTGCTCTTGTCAATTTCCATCACTCAGAAAGGGACTTGAAGGG
GCATCAGAAAAAGTGGAAAATGCTAGGATTATTCATAAAAGGAGATTGTCCTTCCCAAAA
TTTGCAAGCTCAATTGACAGGATAAACACAAGGAAATATACAAGTGACAAAATATTCAAA
AGCCATAATATATCAAAAAGTTACATAGTTGCAGCCTCGTCAGAACACTGTGAAATCTCC
TCTAAAGATGGTTTTTGGAAGCAATTGAATGCATTATACCAATTTTTTCGACCGCACACT
ATATTTGGAACAATAATAGGGATCAGTTCAGTTTCTATTCTCCCAATAAAATCGTTAGCA
GATATTTCTCCCACATTTTTTGTGGGACTATTGAAGGCCTTAATTCCTTCTCTTTTAATG
AACGTTTATGTGGTAGGATTAAATCAACTTTTTGATGTGGAAATTGACAAGGTGAACAAA
CCAAATTTGCCACTAGCTTCTGGAGAAATTTCAATGGAACTAGGCATAGCAATAGTTATC
ACCTCCCTAATTGTGAGTTTTGGTATGGGAATTAAGTTTCAATCTCCACCATTGTTAGCT
GCTCTCATTGTTAGCTTTTTTCTTGGGAGTGCATATTCTATAGAGTTACCTTTACTTAGA
TGGAAAAGAAATGCAGCCTTGGCTGCAATATGCATTATGGTTGTGAGGGCTATCGTTGTT
CAGTTTGCTTTCTTTGCACATATTCAGAAGTATGTGCTGGTTAGGCCTATGCTCTATACA
AGATCTCTGGTATTTGCTGTCACTTTTATGTGTATCTTCACTGCTGTCATTGCCCTATTT
AAGGACATACCTGATGTGGATGGTGATAGAGACTTTGGAATCCAATCTTTCAGTGTGAGG
CTTGGCCAAGAACGAGTATTTTGGCTATGTATTAGCATGCTTGTAGCTGCATATGGAGTT
GCTATGGTGATTGGAGCTACTACTTCTTCCCTTTTCAGCAGGCTTGTCACTGTTTTAGGG
CATTTCTTACTCGCTAGCTTTCTTTTATTTCAAGCCCGATCGGTCGATATAACAAGTCAA
ATATCAGTAACTTCTTTTTATATGTTTATATGGAAGTTATTCTATGCGGAGTACCTTCTG
ATTCCCTTCTTTCGCTAA

Peptide Sequence

PEP ID

XP_016437866.1
PEP Infomation

PREDICTED: homogentisate geranylgeranyltransferase-like [Nicotiana tabacum]
Sequence

MLHLHACSCQFPSLRKGLEGASEKVENARIIHKRRLSFPKFASSIDRINTRKYTSDKIFK
SHNISKSYIVAASSEHCEISSKDGFWKQLNALYQFFRPHTIFGTIIGISSVSILPIKSLA
DISPTFFVGLLKALIPSLLMNVYVVGLNQLFDVEIDKVNKPNLPLASGEISMELGIAIVI
TSLIVSFGMGIKFQSPPLLAALIVSFFLGSAYSIELPLLRWKRNAALAAICIMVVRAIVV
QFAFFAHIQKYVLVRPMLYTRSLVFAVTFMCIFTAVIALFKDIPDVDGDRDFGIQSFSVR
LGQERVFWLCISMLVAAYGVAMVIGATTSSLFSRLVTVLGHFLLASFLLFQARSVDITSQ
ISVTSFYMFIWKLFYAEYLLIPFFR

Transcript Sequence

Gene sequence data has not been registered.